PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK22311.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRAS
Protein Properties Length: 91aa    MW: 10381.3 Da    PI: 8.4985
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK22311.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS54.22.8e-171289187271
       GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                 ++ ++++rv++gE+laV++    h l+d++++       ++ lv +l+P+++++veq++   s+sFl+rf+ +l+yys++fds+
  PK22311.1  12 LNVGVSTFRVRRGETLAVHWLR--HCLYDSTGPDWR----TIGLVEELRPRIFTLVEQDIAQ-SGSFLDRFVGSLQYYSTMFDSI 89 
                5677899*************99..888888887777....*******************998.899******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098510.58191IPR005202Transcription factor GRAS
PfamPF035149.7E-151289IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
XPVVRNPKTG LLNVGVSTFR VRRGETLAVH WLRHCLYDST GPDWRTIGLV EELRPRIFTL  60
VEQDIAQSGS FLDRFVGSLQ YYSTMFDSIG X
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200779.15e-35hypothetical protein PRUPE_ppa023981mg, partial
SwissprotQ9AVK47e-24SCR_PEA; Protein SCARECROW
TrEMBLM5VYE35e-35M5VYE3_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_07s0005g03700.t016e-33(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.13e-24GRAS family protein